1 - 20 of 34 Works in Genii (Stargate)
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Summary
This is an AU slow-burn.
Atlantis and the Genii come to an uneasy alliance. Atlantis, cut off from earth for the past two years are low on power, supplies, and on the brink of starvation. They decide to cut a deal.
The Genii request one thing: a strong carrier of the Ancient Gene to align themselves in the most binding of treaties: marriage.
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It’s a Football Thing - John Sheppard x reader by Distracted_Milkshake
Fandoms: Stargate Atlantis
27 May 2025
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John insisted you come along on a mission, since it was your project and your idea, which would’ve been fine, if only your intel had been accurate, and he didn’t bring football into it.
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While searching for the remains of the time-machine-jumper that brought Elizabeth Weir back in time, McKay finds reference to one of Janus's contemporaries, another scientist who worked to find a solution to the problem of the Wraith, only using methods that eventually even the Ancients wouldn't countenance. The team head to the planet where this Ancient had his laboratory, but hit trouble as soon as they're through the gate. Stuck on a frozen world, the only viable place to wait is the laboratory, only it is not quite as abandoned as they think.
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Story of a mission gone horribly wrong and how perspectives on John Sheppard may drastically differ.
This fic was written for the SGA GenMayathon 2025. Based on the wonderful anonymous prompt of John being willing to do terrible things to keep his people safe.
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Bloodfire Book 1: Arca Pandora (Pandora's Box) by Andromeda (athalara), athalara
Fandoms: Stargate Atlantis, Stargate SG-1, The Night Shift (TV 2014)
11 Aug 2024
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Bloodfires: Humans gifted with abilities beyond normal humans. Once hunted as monsters and now irreplaceable in military, intelligence, law enforcement, rescue and medical services, Bloodfires are always treading a fine line between acceptance and mistrust.
One year ago, the Atlantis Expedition left for the Pegasus Galaxy and had not been heard of since. Family issues kept Dr. McKay on Earth, but now he's joining the Second Expedition led by Col. John Sheppard, even if he must hack the gate to do so.
But when they step through the gate, what they find is a totally deserted city.Series
- Part 1 of Bloodfire
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Auras Part 4 starts about ten minutes from the end of Part 3 in a continuing saga of life in Atlantis with new and dangerous situations, relentless enemies, hopeful possibilities, and both personal and relationship development for our favourite characters. It is, as always, filled with angst, trauma and missions – good, bad and horrific, but also with hope, love and, above all, the warmth of friendship.
Series
- Part 4 of Auras
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How had the fate of the entire galaxy come to rest on a single decision?
My choice. My responsibility. It had to be me. Someone else might’ve gotten it wrong.Against impossible odds, Davina Shepard activated the Crucible and destroyed the Reapers. Caught in the explosion ripping through the Mass Relays, she winds up in the Pegasus Galaxy — 178 years in the past, where she meets an unexpected ally. She can’t remember who she is or where she came from, but her dreams are haunted with visions of a guardian—her Archangel.
Several years after the Reaper War, a single piece of intel delivered to Liara by a Shadow Broker Operative appears to be the key to finding Davina. Now all Liara has to do is convince a hopeless and heartbroken Garrus that Davina is alive and she and the rest of the Normandy crew can save her—with his help.
And she thought Davina fighting a Reaper on foot was difficult….
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Earth Rise by etherealhearts
Fandoms: Stargate SG-1, Stargate Atlantis, Stargate Universe, Stargate (1994)
29 Sep 2023
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When Dr Daniel Jackson, Colonel Jack O'Neill and Dr Andrew Cross, along with the other soldiers, destroyed Ra and his ship back on Abydos, it set off a chain of events. Now everyone's lives are being ruined as a direct result. First Dr Maria Gonzalez loses her best friend, to the Stargate that was believed to be obsolete, then Daniel loses his wife and brother-in-law to the same fate. And both are left defeated when they fail to bring the ones they love back.
Thus, the SGC was created, with the formation of SG-1 a key moment in history. Earth's first line of defence against the dangers of the unknown Universe.
Jack and his team are critical in the continued exploration of the Stargate, and the fight against the Goa'uld threat. To prolong the longevity and survival of their home and their race, as well as their lives.
Series
- Part 1 of Star Walkers
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Mina wasn't sure what she was getting into when she agreed to marry Acastus Kolya. What started out as duty changed to true feelings, but does her husband feel the same? It's hard to tell when you are married to a man filled with so much hate.
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Rodney is dying he offered ascension will he take it? When John is trying to save his life.
(this is set after the Tao of Rodney, and after they have met Queen Harmony.)
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Out Of Time by WildMoonFiction4Ever
Fandoms: Stargate Atlantis, Stargate - All Media Types
27 Apr 2023
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McKay's eyes said to John “It’s not worth it take the ZedPM and go.” John shook his head no it was not happening, he wouldn’t leave without Rodney. Kolya wasn’t impressed his voice broke the moment.
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Through the Looking Glass and into Heaven by TheHunterintheWest
Fandoms: Stargate (1994), Stargate SG-1, Stargate - All Media Types
03 Mar 2023
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Stargate was one of the defining science fiction shows for a generation of genre fans. This is my humble attempt at a reboot that keeps the spirit of the original show and film while adding some more depth and modern finishes.
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Lieutenant Colonel John Sheppard has had his fair share of bad, fucked up days. Missions going to hell. Shot-down choppers, derailed trains, Stargate addresses refusing to lock. Kidnappings and First Contact ending at gunpoint and close calls. Mysterious flora and fauna out to get you. Simple misunderstandings upsetting three days’ worth of careful negotiation with the locals. It’s all part of the deal.
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AR-18. Rookies. Four strangers meant to become a team. Their test to enter the fold of Atlantis turns into much more than a live scenario exercise when reality interrupts the simulation. Suddenly, they must prove themselves in the direst of ways.(a story of the tumultuous beginning of a new Atlantis Recon Team.)
Series
- Part 9 of the ghost and the raven
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Trapped on a world in which he cannot escape and knowing his team believes he is dead, Sheppard is on the run with no team, no backup, and no chance of rescue.
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Just as Strong Together by jayme_stone
Fandoms: Stargate Atlantis, Stargate SG-1, Buffy the Vampire Slayer (TV)
27 Jan 2022
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This is the fourth story in my Stronger Series and continues the story of Dr. Mariah Gray and the residents of the City of Atlantis. At this point, I am doing the fifth season my way since it was my least favorite season and save a couple of stellar episodes, was painful to watch. So this story will be mainly original with a couple of the awesome episodes thrown in. And NO, Atlantis will not be going to Earth. It’s going to stay where it belongs.
So this is a Buffy the Vampire Slayer/StarGate Atlantis Crossover, but without Buffy or any of the Scoobies. Ok, previous statement is a little bit of a lie. There is one cameo from the big B herself, but otherwise I took the Slayer lore and shoved it into a Stargate Atlantis story. Don’t say you weren’t warned….
Series
- Part 6 of Stronger Series
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Rewrite of Stargate Atlantis episode: Coup d'Etat in which AR-1 is captured too, and the three factions of Genii are working together.
For the sake of characterization, there will be lots left between the lines- after heavy editing I found that this method was the best because that's the way these characters communicate. Hope you enjoy!
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Part 3 starts right where Part 2 left off, in a continuing saga of life on Atlantis with new and dangerous situations, hopeful possibilities, and a great deal of personal growth for many of our favourite characters (especially John!). Just like Parts 1 & 2, Part 3 is filled with angst, trauma, and missions – good and bad and horrific, but also with hope, love and, above all, the warmth of friendship.
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- Part 3 of Auras
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Sora in Atlantis, with her enemies, allies, and ghosts.
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Genetic Drift by notenuffcaffeine
Fandoms: Teen Wolf (TV), Stargate Atlantis, The Sentinel (TV)
06 Jan 2021
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Introducing the new team to Atlantis hits a few bumps in the road.
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- Part 4 of Adaptations
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John and Todd find a quantum mirror in an abandoned lab, and they are pulled through the smoky mirror glass into another version of Atlantis and Pegasus that couldn't be more different from their own reality. The Genii rule the entire galaxy, and Atlantis and the Wraith have built an alliance that is based on true friendship, something John has a hard time to believe.
To make their way back to their own world, they need to find a ZPM, but most of all, they need the help of the mirror New Lanteans and their allied Wraith. To add to the confusion, John also has to deal with the fact that the Commander of the mirror Atlantis is Colonel Aiden Ford, the counterpart of his former teammate - who is mated to mirror Todd and reacting to John's Todd in a way that makes John feel pretty jealous all of a sudden...